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odmApi::ImportExpressionSignalRunRequest

Properties

Name Type Description Notes
source character The source parameter is ignored and will be removed in version 1.61. The source is automatically extracted from the link [optional] [Enum: [S3, HTTP, LOCAL]]
metadataLink character [optional]
dataLink character
templateId character [optional]
previousVersion character [optional]
numberOfFeatureAttributes integer Integer value that specifies the number of columns related to the feature in the uploaded data frame, and indicates the starting position of the sample data. This attribute is not needed if the uploaded file is in GCT format. [optional]
dataClass character A mandatory parameter with the following possible values: `Bulk transcriptomics`, `Single-cell transcriptomics`, `Differential abundance (FC, pval, etc.)`, `Pathway analysis`, `Proteomics`, `Single-cell proteomics`, `Metabolomics`, `Lipidomics`, `Epigenomics`, `DNA methylation`, `Chemoinformatics`, `Imaging features`, `Gene panel data`, `Biomarker data`, `Physical measures`, `Blood counts`, `Other body fluid counts`, `Long-read sequencing (Nanopore, PacBio)`, `Flow Cytometry (FCS)`, `Spatial transcriptomics`, `Phenomics`, `Copy number alterations`, `Microbiome / Metagenomics`, `Immune repertoire`, `Genetic screens (CRISPR / RNAi)`, `Cell imaging`, `Document`, `Other`. In case the parameter is not set the dataClass is automatically defined as `Other`. [optional]
measurementSeparator character This parameter is necessary when your file contains multiple measurement columns for each sample, library, or preparation. It represents the character that distinguishes the sample/library/preparation name from the measurement name in column headers. Supported separators include `. , : ; _ - / \ `, with the allowance for multi-character separators.